debian/0002755000000000000000000000000012137471735007202 5ustar debian/source/0002755000000000000000000000000011355621676010504 5ustar debian/source/format0000644000000000000000000000001411355621677011711 0ustar 3.0 (quilt) debian/compat0000644000000000000000000000000212126150345010363 0ustar 9 debian/r-cran-amelia.doc-base0000644000000000000000000000047511355621661013211 0ustar Document: r-cran-amelia Title: Debian Amelia Manual Author: James Honaker, Gary King, and Matthew Blackwell Abstract: An introduction to using the Amelia package for R. Section: Science/Mathematics Format: PDF Index: /usr/lib/R/site-library/Amelia/doc/amelia.pdf Files: /usr/lib/R/site-library/Amelia/doc/amelia.pdf debian/copyright0000644000000000000000000001007611355621661011133 0ustar This is the Debian package of the GNU R package known as "Zelig". The upstream authors are: James Honaker Gary King Matthew Blackwell This package was created by Chris Lawrence , based on Dirk Eddelbuettel's packaging of r-cran-car. The sources were downloaded from http://gking.harvard.edu/src/contrib/ The package was renamed from its upstream name 'Amelia' to 'r-cran-amelia' to fit the pattern of CRAN (and non-CRAN) packages for R. Amelia II: A Program for Missing Data (Amelia) Copyright (C) 2006-09 James Honaker, Matthew Blackwell, and Gary King This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version. This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. You should have received a copy of the GNU General Public License along with this program; if not, write to the Free Software Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301, USA. On Debian systems, the GPL is included in the file /usr/share/common-licenses/GPL. The BWidget widgets included in the upstream source tarball are an obsolete version; we use the version provided by the Debian "bwidgets" package instead. The Tcl/Tk Combobox widget was written by Bryan Oakley and is subject to the following license (the same BSD-style license applied to Tcl/Tk), per email from the author (Message-ID: <7d5312b00805301128u3b5253c6y30b198051dfb0076@mail.gmail.com>): Combobox version 2.3 Copyright (c) 1998-2003, Bryan Douglas Oakley This software is copyrighted by Bryan Douglas Oakley. The following terms apply to all files associated with the software unless explicitly disclaimed in individual files. The authors hereby grant permission to use, copy, modify, distribute, and license this software and its documentation for any purpose, provided that existing copyright notices are retained in all copies and that this notice is included verbatim in any distributions. No written agreement, license, or royalty fee is required for any of the authorized uses. Modifications to this software may be copyrighted by their authors and need not follow the licensing terms described here, provided that the new terms are clearly indicated on the first page of each file where they apply. IN NO EVENT SHALL THE AUTHORS OR DISTRIBUTORS BE LIABLE TO ANY PARTY FOR DIRECT, INDIRECT, SPECIAL, INCIDENTAL, OR CONSEQUENTIAL DAMAGES ARISING OUT OF THE USE OF THIS SOFTWARE, ITS DOCUMENTATION, OR ANY DERIVATIVES THEREOF, EVEN IF THE AUTHORS HAVE BEEN ADVISED OF THE POSSIBILITY OF SUCH DAMAGE. THE AUTHORS AND DISTRIBUTORS SPECIFICALLY DISCLAIM ANY WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE, AND NON-INFRINGEMENT. THIS SOFTWARE IS PROVIDED ON AN "AS IS" BASIS, AND THE AUTHORS AND DISTRIBUTORS HAVE NO OBLIGATION TO PROVIDE MAINTENANCE, SUPPORT, UPDATES, ENHANCEMENTS, OR MODIFICATIONS. GOVERNMENT USE: If you are acquiring this software on behalf of the U.S. government, the Government shall have only "Restricted Rights" in the software and related documentation as defined in the Federal Acquisition Regulations (FARs) in Clause 52.227.19 (c) (2). If you are acquiring the software on behalf of the Department of Defense, the software shall be classified as "Commercial Computer Software" and the Government shall have only "Restricted Rights" as defined in Clause 252.227-7013 (c) (1) of DFARs. Notwithstanding the foregoing, the authors grant the U.S. Government and others acting in its behalf permission to use and distribute the software in accordance with the terms specified in this license. The upstream DESCRIPTION file for this package is available in /usr/lib/R/site-library/Amelia/ debian/overrides0000644000000000000000000000011111355621661011112 0ustar r-cran-amelia: image-file-in-usr-lib usr/lib/R/site-library/Amelia/doc/* debian/rules0000755000000000000000000000156212130127764010255 0ustar #!/usr/bin/make -f # -*- makefile -*- # debian/rules file for the Debian/GNU Linux r-cran-car package # Copyright 2003 by Dirk Eddelbuettel DPKG_EXPORT_BUILDFLAGS = 1 include /usr/share/dpkg/buildflags.mk PKG_CFLAGS=$(CFLAGS) PKG_CXXFLAGS=$(CXXFLAGS) PKG_CPPFLAGS=$(CPPFLAGS) PKG_FFLAGS=$(FFLAGS) export PKG_CFLAGS PKG_CXXFLAGS PKG_CPPFLAGS PKG_FFLAGS makeFlags="LDFLAGS=$(LDFLAGS)" include /usr/share/R/debian/r-cran.mk common-binary-post-install-indep:: ln -s ../../../lib/R/site-library/Amelia/doc/amelia.pdf debian/r-cran-amelia/usr/share/doc/r-cran-amelia/amelia.pdf rm -vf debian/r-cran-amelia/usr/lib/R/site-library/Amelia/COPYING rm -vf debian/r-cran-amelia/usr/lib/R/site-library/Amelia/LICENSE rm -rvf debian/r-cran-amelia/usr/lib/R/site-library/Amelia/tklibs/BWidget-1.7.0 rm -vf debian/r-cran-amelia/usr/share/doc/r-cran-amelia/README debian/patches/0002755000000000000000000000000011355622105010617 5ustar debian/patches/series0000644000000000000000000000003011355622002012017 0ustar debian-changes-1.2-16-1 debian/patches/debian-changes-1.2-16-10000644000000000000000000000262311355622105014253 0ustar Description: Upstream changes introduced in version 1.2-16-1 This patch has been created by dpkg-source during the package build. Here's the last changelog entry, hopefully it gives details on why those changes were made: . r-cran-amelia (1.2-16-1) unstable; urgency=low . * New upstream release. . The person named in the Author field signed this changelog entry. Author: Chris Lawrence --- The information above should follow the Patch Tagging Guidelines, please checkout http://dep.debian.net/deps/dep3/ to learn about the format. Here are templates for supplementary fields that you might want to add: Origin: , Bug: Bug-Debian: http://bugs.debian.org/ Forwarded: Reviewed-By: Last-Update: --- r-cran-amelia-1.2-16.orig/man/amelia.package.Rd +++ r-cran-amelia-1.2-16/man/amelia.package.Rd @@ -13,7 +13,7 @@ Date: \tab 2006-03-03\cr License: \tab See Manual\cr } You can use the package in one of two ways: either by invoking the -\code{ameliagui()} command and running the program from a graphical +\code{AmeliaView()} command and running the program from a graphical interface or by loading in your data and then running the \code{amelia} function on the data. debian/watch0000644000000000000000000000010511515124251010210 0ustar version=2 http://cran.r-project.org/src/contrib/Amelia_(.*)\.tar\.gz debian/control0000644000000000000000000000276612134051677010612 0ustar Source: r-cran-amelia Section: gnu-r Priority: optional Maintainer: Chris Lawrence Build-Depends: debhelper (>> 9), cdbs, r-base-dev (>= 3.0), r-cran-foreign, bwidget, r-cran-rcpp (>= 0.10.0.4), r-cran-rcpparmadillo, dpkg-dev (>= 1.16.1~) Standards-Version: 3.9.3 Homepage: http://gking.harvard.edu/amelia/ Package: r-cran-amelia Architecture: any Depends: ${R:Depends}, ${shlibs:Depends}, r-cran-foreign, bwidget, r-cran-rcpparmadillo Suggests: r-cran-zelig Description: GNU R package supporting multiple imputation of missing data Amelia II "multiply imputes" missing data in a single cross-section (such as a survey), from a time series (like variables collected for each year in a country), or from a time-series-cross-sectional data set (such as collected by years for each of several countries). Amelia II implements our bootstrapping-based algorithm that gives essentially the same answers as the standard IP or EMis approaches, is usually considerably faster than existing approaches and can handle many more variables. . The program also generalizes existing approaches by allowing for trends in time series across observations within a cross-sectional unit, as well as priors that allow experts to incorporate beliefs they have about the values of missing cells in their data. Amelia II also includes useful diagnostics of the fit of multiple imputation models. The program works from the R command line or via a graphical user interface that does not require users to know R. debian/changelog0000644000000000000000000000313112137100313011025 0ustar r-cran-amelia (1.7.1-2) unstable; urgency=low * Override lintian error due to libRcpp. -- Chris Lawrence Sat, 27 Apr 2013 21:52:11 -0400 r-cran-amelia (1.7.1-1) unstable; urgency=low * New upstream release. * Now a binary: any package, since upstream now uses C++. -- Chris Lawrence Wed, 03 Apr 2013 03:48:18 -0400 r-cran-amelia (1.6.1-2) unstable; urgency=low * Rebuild for R 3.0. -- Chris Lawrence Mon, 01 Apr 2013 20:04:24 -0400 r-cran-amelia (1.6.1-1) unstable; urgency=low * New upstream release. -- Chris Lawrence Sun, 13 May 2012 22:12:07 -0400 r-cran-amelia (1.5-4-1) unstable; urgency=low * New upstream release. -- Chris Lawrence Mon, 29 Aug 2011 18:27:52 -0400 r-cran-amelia (1.2-18-1) unstable; urgency=low * New upstream release. -- Chris Lawrence Mon, 17 Jan 2011 14:37:42 -0600 r-cran-amelia (1.2-17-1) unstable; urgency=low * New upstream release. -- Chris Lawrence Thu, 13 May 2010 02:05:27 -0500 r-cran-amelia (1.2-16-1) unstable; urgency=low * New upstream release. -- Chris Lawrence Sat, 03 Apr 2010 06:17:05 -0500 r-cran-amelia (1.2-9-1) unstable; urgency=low * New upstream release. * Install doc-base file for PDF documentation. -- Chris Lawrence Wed, 01 Jul 2009 20:43:20 -0500 r-cran-amelia (1.2-2-1) unstable; urgency=low * New package. (Closes: #483661) -- Chris Lawrence Wed, 01 Jul 2009 20:18:16 -0500 debian/r-cran-amelia.lintian-overrides0000644000000000000000000000030612137100245015150 0ustar # libRcpp.so is in a private path, we need rpath to access it r-cran-amelia binary: binary-or-shlib-defines-rpath # Images are part of the GUI interface r-cran-amelia binary: image-file-in-usr-lib