debian/0000755000000000000000000000000012141445522007166 5ustar debian/compat0000644000000000000000000000000212141445343010365 0ustar 9 debian/README.test0000644000000000000000000000043712141445147011033 0ustar Notes on how this package can be tested. ──────────────────────────────────────── This package can be tested by loading it into R with the command ‘library(epibasix)’ in order to confirm its integrity. debian/copyright0000644000000000000000000000240212141444230011112 0ustar Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ Upstream-Name: epibasix Upstream-Contact: Michael A Rotondi Source: http://cran.r-project.org/src/contrib/epibasix_1.3.tar.gz Files: * Copyright: (C) 2007–2009 Michael A Rotondi License: GPL2+ This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version. . This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. . You should have received a copy of the GNU General Public License along with this program; if not, write to the Free Software Foundation, Inc., 51 Franklin Street, Fifth Floor, Boston, MA 02110-1301 USA. . On Debian systems, the complete text of the GNU General Public License version 2 can be found in `/usr/share/common-licenses/GPL-2'. Files: debian/* Copyright: 2011 Andreas Tille 2009 Charles Plessy License: GPL2+ Same as epibasix itself debian/changelog0000644000000000000000000000412512141445510011037 0ustar r-cran-epibasix (1.3-1) unstable; urgency=low * New upstream release * Normalised Debian copyright file with config-model-edit. * Does not depend on r-cran-foreign nor r-cran-sp. * Normalised debian/control with config-model-edit. * Normalised VCS URLs following Lintian's standard. * Acquire R:Depends directly from r-base-dev. * Renamed debian/README.Debian debian/README.test. * Using Debhelper 9. * Conforms to Policy version 3.9.4. -- Charles Plessy Sun, 05 May 2013 21:06:13 +0900 r-cran-epibasix (1.1-3) unstable; urgency=low * Rebuild against latest R Closes: #646042 * Standards-Version: 3.9.2 (no changes needed) * Debhelper 8 (control+compat) * Fixed Vcs fields * debian/source/format: 3.0 (quilt) * debian/copyright: DEP5 fixes -- Andreas Tille Fri, 21 Oct 2011 13:58:06 +0200 r-cran-epibasix (1.1-2) unstable; urgency=low * Rebuilt against R >= 2.10 in order to work with Squeeze's R. * Incremented Standards-Version to reflect conformance with Policy 3.8.4 (debian/control, no changes needed). * Depend on a version equal or superior than the R upstream release that was used to build this package, using a R:Depends substvar (debian/control, debian/rules). * Added a note to explain how to test this package (debian/README.Debian). * Indicate a more generic URL in debian/copyright, to reduce redundancy with debian/watch. -- Charles Plessy Wed, 19 May 2010 08:48:28 +0900 r-cran-epibasix (1.1-1) unstable; urgency=low * New upstream release. * debian/control: - Added myself as Uploader. - Incremented Standards-Version to reflect conformance with Policy 3.8.1 (no changes needed). - Changed Section from ‘science’ to ‘gnu-r’ to reflect the choice of our archive administrators (this field is not authoritative). -- Charles Plessy Tue, 26 May 2009 13:24:43 +0900 r-cran-epibasix (0.1-1) unstable; urgency=low * Initial release (Closes: #515643). -- Andreas Tille Tue, 17 Feb 2009 17:31:56 +0100 debian/source/0000755000000000000000000000000012141445522010466 5ustar debian/source/format0000644000000000000000000000001411650260271011674 0ustar 3.0 (quilt) debian/rules0000755000000000000000000000007212141445070010243 0ustar #!/usr/bin/make -f include /usr/share/R/debian/r-cran.mk debian/watch0000644000000000000000000000011411134442766010223 0ustar version=3 http://cran.r-project.org/src/contrib/epibasix_([-\d.]*)\.tar\.gz debian/control0000644000000000000000000000276312141445457010610 0ustar Source: r-cran-epibasix Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille , Charles Plessy Section: gnu-r Priority: optional Build-Depends: debhelper (>= 9), cdbs, r-base-dev Standards-Version: 3.9.4 Vcs-Browser: http://anonscm.debian.org/viewvc/debian-med/trunk/packages/R/r-cran-epibasix/trunk/ Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/R/r-cran-epibasix/trunk/ Homepage: http://cran.r-project.org/web/packages/epibasix Package: r-cran-epibasix Architecture: any Depends: ${shlibs:Depends}, ${R:Depends} Suggests: r-cran-surveillance, r-cran-epi, r-cran-epitools Description: GNU R Elementary Epidemiological Functions Elementary Epidemiological Functions for a Graduate Epidemiology / Biostatistics Course. . This package contains elementary tools for analysis of common epidemiological problems, ranging from sample size estimation, through 2x2 contingency table analysis and basic measures of agreement (kappa, sensitivity/specificity). Appropriate print and summary statements are also written to facilitate interpretation wherever possible. This package is a work in progress, so any comments or suggestions would be appreciated. Source code is commented throughout to facilitate modification. The target audience includes graduate students in various epi/biostatistics courses. . Epibasix was developed in Canada.