debian/0000755000000000000000000000000012147141765007176 5ustar debian/control0000644000000000000000000000242312147141205010567 0ustar Source: r-cran-medadherence Maintainer: Debian Med Packaging Team Uploaders: Andreas Tille Section: gnu-r Priority: optional Build-Depends: debhelper (>= 9.0), cdbs, r-base-dev Standards-Version: 3.9.4 Vcs-Browser: http://svn.debian.org/wsvn/debian-med/trunk/packages/R/r-cran-medadherence/trunk/ Vcs-Svn: svn://svn.debian.org/debian-med/trunk/packages/R/r-cran-medadherence/trunk/ Homepage: http://cran.r-project.org/web/packages/medAdherence/ Package: r-cran-medadherence Architecture: any Depends: ${shlibs:Depends}, ${R:Depends} Description: GNU R Medication Adherence: Commonly Used Definitions Adherence is defined as "the extent to which a person's behavior coincides with medical or health advice", which is very important, for both clinical researchers and physicians, to identify the treatment effect of a specific medication(s). . A variety of measures have been developed to calculate the medication adherence. Definitions and methods to address adherence differ greatly in public literature. Choosing which definition should be determined by overall study goals. This package provides the functions to calculate medication adherence based on commonly used definitions. debian/rules0000755000000000000000000000031511301257176010250 0ustar #!/usr/bin/make -f # -*- makefile -*- # debian/rules file for the Debian/GNU Linux r-cran-epicalc package # Copyright 2008 by Andreas Tille include /usr/share/R/debian/r-cran.mk debian/watch0000644000000000000000000000014512146723753010231 0ustar version=3 http://cran.r-project.org/src/contrib/Archive/medAdherence/medAdherence_([-\d.]+)\.tar\.gz debian/copyright0000644000000000000000000000343612147141765011137 0ustar Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ Upstream-Name: medAdherence Upstream-Contact: Xiangyang Ye Source: http://cran.r-project.org/src/contrib/Archive/medAdherence/ Files: * Copyright: 2009-2012 Xiangyang Ye, Pharmacotherapy Outcomes Research Center, Univertiy of Utah License: GPL-2+ Comment: The upstream file is lacking an explicite COPYRIGHT file but I've go the following mail from the author: . On Mon, Feb 01, 2010 at 10:47:07AM -0700, Xiangyang Ye wrote: Is it OK for you add the file GPLv2 (http://www.gnu.org/licenses/gpl-2.0.txt) in the tarball given the package was developed under GPL version 2? I am comfortable for this if it's acceptable. I promise that I will add this text file in the future revision. . I think there is no need to formally change the tarball if this permission is explicitly given. Files: debian/* Copyright: 2008-2013 Andreas Tille 2009 Charles Plessy License: GPL-2+ License: GPL-2+ This program is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation, either version 2 of the License, or (at your option) any later version. . This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. . You should have received a copy of the GNU General Public License along with this program. If not, see . . On Debian systems, the complete text of the GNU Public License version 2 can be found in `/usr/share/common-licenses/GPL-2'. debian/source/0000755000000000000000000000000012145173556010477 5ustar debian/source/format0000644000000000000000000000001411301174376011677 0ustar 3.0 (quilt) debian/README.test0000644000000000000000000000055212146747407011042 0ustar Notes on how this package can be tested. ──────────────────────────────────────── This package can be tested by loading it into R with the command ‘library(medAdherence)’ in order to confirm its integrity. -- Andreas Tille Tue, 21 May 2013 18:54:06 +0200 debian/changelog0000644000000000000000000000164512147141403011043 0ustar r-cran-medadherence (1.03-1) unstable; urgency=low * debian/watch: Archived on CRAN - so changed download location * debian/source/format: 3.0 (quilt) * debian/control: - Standards-Version: 3.9.4 (no changes needed) - Deleted DM-Upload-Allowed - Debhelper 9 (also d/compat) - normalised format - Depends: ${R:Depends} Closes: #709188 * debian/README.test: explain how to test the package * debian/copyright: DEP5 -- Andreas Tille Tue, 21 May 2013 18:54:06 +0200 r-cran-medadherence (1.02-1) unstable; urgency=low * Initial release (closes: #557200) Remark about previous rejection: - The data file in question was removed. - Upstream forgot to include the GPL COPYRIGHT file but has given explicite permission to include it in a private mail (see copyright file). -- Andreas Tille Thu, 19 Nov 2009 15:38:39 +0100 debian/compat0000644000000000000000000000000212146723543010373 0ustar 9