debian/0000755000000000000000000000000012216112013007153 5ustar debian/rules0000755000000000000000000000003612216112013010232 0ustar #!/usr/bin/make -f %: dh $@ debian/control0000644000000000000000000000270712216112013010564 0ustar Source: libbio-asn1-entrezgene-perl Section: perl Priority: optional Maintainer: Debian Perl Group Uploaders: gregor herrmann , Florian Schlichting Build-Depends: debhelper (>= 8) Build-Depends-Indep: perl, bioperl Standards-Version: 3.9.4 Homepage: https://metacpan.org/release/Bio-ASN1-EntrezGene/ Vcs-Git: git://anonscm.debian.org/pkg-perl/packages/libbio-asn1-entrezgene-perl.git Vcs-Browser: http://anonscm.debian.org/gitweb/?p=pkg-perl/packages/libbio-asn1-entrezgene-perl.git Package: libbio-asn1-entrezgene-perl Architecture: all Depends: ${misc:Depends}, ${perl:Depends} Description: parser for NCBI Entrez Gene and NCBI Sequence records Bio::ASN1::EntrezGene and Bio::ASN1::Sequence are regular expression-based parsers for NCBI Entrez Gene genome databases (). . They parse ASN.1-formatted Entrez Gene records and NCBI sequences, returning data structures that contain all data items from the gene records or the sequence records. . The parser will report error & line number if input data does not conform to the NCBI Entrez Gene genome or NCBI Sequence annotation file format. . Bio::ASN1::Sequence is basically a modified version of the high-performance Bio::ASN1::EntrezGene parser. However this standalone module exists since it is more efficient to keep Sequence-specific code out of EntrezGene.pm. debian/source/0000755000000000000000000000000012216112013010453 5ustar debian/source/format0000644000000000000000000000001412216112013011661 0ustar 3.0 (quilt) debian/changelog0000644000000000000000000000464612216112013011037 0ustar libbio-asn1-entrezgene-perl (1.700-1) unstable; urgency=low [ Salvatore Bonaccorso ] * Change Vcs-Git to canonical URI (git://anonscm.debian.org) * Change search.cpan.org based URIs to metacpan.org based URIs [ Axel Beckert ] * debian/copyright: migrate pre-1.0 format to 1.0 using "cme fix dpkg- copyright" [ gregor herrmann ] * New upstream release. * Drop spelling patch, applied upstream. * Update years of upstream and packaging copyright. * Declare compliance with Debian Policy 3.9.4. -- gregor herrmann Tue, 17 Sep 2013 19:40:23 +0200 libbio-asn1-entrezgene-perl (1.100-1) unstable; urgency=low [ Florian Schlichting ] * Imported Upstream version 1.100. * Bumped debhelper compatibility to 8, switched to short d/rules. * Set source format to "3.0 (quilt)". * Refreshed debian/copyright. * Bumped Standards-Version to 3.9.2 (no change). * Added myself to Uploaders. * Added fix-spelling-error.patch. [ Nathan Handler ] * debian/watch: Update to ignore development releases. [ Salvatore Bonaccorso ] * debian/control: Changed: Replace versioned (build-)dependency on perl (>= 5.6.0-{12,16}) with an unversioned dependency on perl (as permitted by Debian Policy 3.8.3). [ Ansgar Burchardt ] * debian/control: Convert Vcs-* fields to Git. [ gregor herrmann ] * debian/watch: add uversionmangles to deal with version suffix and 2-digit minor versions. -- Florian Schlichting Thu, 12 Jan 2012 23:41:22 +0100 libbio-asn1-entrezgene-perl (1.091-2) unstable; urgency=low [ David Paleino ] * Removed myself from Uploaders (Closes: #509506) [ gregor herrmann ] * debian/control: - added: Vcs-Svn field (source stanza); Vcs-Browser field (source stanza); Homepage field (source stanza). Removed: Homepage pseudo-field (Description); XS-Vcs-Svn fields. (source stanza) - added: ${misc:Depends} to Depends: field - set Standards-Version to 3.8.0 (no changes) - add /me to Uploaders * debian/watch: use dist-based URL. * Set debhelper compatibility level to 7; adapt debian/{control,compat,rules}. * debian/copyright: switch to new format. -- gregor herrmann Wed, 07 Jan 2009 17:41:12 +0100 libbio-asn1-entrezgene-perl (1.091-1) unstable; urgency=low * Initial release (Closes: #442135) -- David Paleino Thu, 13 Sep 2007 14:23:17 +0200 debian/libbio-asn1-entrezgene-perl.examples0000644000000000000000000000001312216112013016111 0ustar examples/* debian/compat0000644000000000000000000000000212216112013010351 0ustar 8 debian/copyright0000644000000000000000000000233712216112013011113 0ustar Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ Upstream-Name: Bio-ASN1-EntrezGene Upstream-Contact: Dr. Mingyi Liu Source: https://metacpan.org/release/Bio-ASN1-EntrezGene/ Files: * Copyright: 2005-2013, Dr. Mingyi Liu , GPC Biotech AG and Altana Research Institute License: Artistic or GPL-1+ Files: debian/* Copyright: 2007, David Paleino 2009-2013, gregor herrmann 2012, Florian Schlichting License: Artistic or GPL-1+ License: Artistic This program is free software; you can redistribute it and/or modify it under the terms of the Artistic License, which comes with Perl. . On Debian systems, the complete text of the Artistic License can be found in `/usr/share/common-licenses/Artistic'. License: GPL-1+ This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 1, or (at your option) any later version. . On Debian systems, the complete text of version 1 of the GNU General Public License can be found in `/usr/share/common-licenses/GPL-1'. debian/watch0000644000000000000000000000030712216112013010204 0ustar version=3 opts="uversionmangle=s/-withoutworldwriteables//;s/\.\d{2}/$&0/" \ https://metacpan.org/release/Bio-ASN1-EntrezGene/ .*/Bio-ASN1-EntrezGene-v?(\d[\d.]+.*)\.(?:tar(?:\.gz|\.bz2)?|tgz|zip)