debian/0000755000000000000000000000000012006237232007163 5ustar debian/rules0000755000000000000000000000035012006237232010241 0ustar #!/usr/bin/make -f PACKAGE = $(shell dh_listpackages) TMP = $(CURDIR)/debian/$(PACKAGE) %: dh $@ override_dh_auto_install: dh_auto_install # Remove man pages unuseful rm $(TMP)/usr/share/man/man3/Bio::Chado::Schema::Result* debian/control0000644000000000000000000000247112006237232010572 0ustar Source: libbio-chado-schema-perl Maintainer: Debian Perl Group Uploaders: Olivier Sallou Section: perl Priority: optional Build-Depends: debhelper (>= 8) Build-Depends-Indep: libbio-perl-perl, libcarp-clan-perl, libdbd-sqlite3-perl, libdbix-class-perl, libdbix-class-tree-nestedset-perl, libsql-translator-perl, libtest-exception-perl, libtest-warn-perl, perl Standards-Version: 3.9.3 Vcs-Browser: http://anonscm.debian.org/gitweb/?p=pkg-perl/packages/libbio-chado-schema-perl.git Vcs-Git: git://git.debian.org/pkg-perl/packages/libbio-chado-schema-perl.git Homepage: http://search.cpan.org/dist/Bio-Chado-Schema/ Package: libbio-chado-schema-perl Architecture: all Depends: ${misc:Depends}, ${perl:Depends}, libbio-perl-perl, libcarp-clan-perl, libdbix-class-perl, libdbix-class-tree-nestedset-perl Description: DBIx::Class layer for the Chado database schema The module Bio::Chado::Schema is a standard object-relational mapping layer for use with the GMOD Chado database schema. Chado is an open-source modular database schema for biological data. debian/source/0000755000000000000000000000000012006237232010463 5ustar debian/source/format0000644000000000000000000000001412006237232011671 0ustar 3.0 (quilt) debian/changelog0000644000000000000000000000151612006237232011040 0ustar libbio-chado-schema-perl (0.20000-1) unstable; urgency=low [ gregor herrmann ] * debian/control: update {versioned,alternative} (build) dependencies. [ Olivier Sallou ] * New upstream release * debian/patches/bad_whatis_section: patch pod what-is section * debian/changelog: update Standars-Version to 3.9.3. * debian/patches/*: - fix Last-Updated date format for compliance - Add forwarded bug reference -- Olivier Sallou Thu, 12 Jul 2012 17:15:42 +0200 libbio-chado-schema-perl (0.10010-1) unstable; urgency=low * New upstream release -- Olivier Sallou Wed, 16 Nov 2011 08:47:03 +0100 libbio-chado-schema-perl (0.09040-1) unstable; urgency=low * Initial Release (Closes: #647416). -- Olivier Sallou Wed, 2 Nov 2011 15:20:02 +0100 debian/compat0000644000000000000000000000000212006237232010361 0ustar 8 debian/clean0000644000000000000000000000001512006237232010164 0ustar t/var/BCS.db debian/patches/0000755000000000000000000000000012006237232010612 5ustar debian/patches/bad_whatis_section0000644000000000000000000000104012006237232014361 0ustar Subject: Wrong what-is section in man page Description: Fix the what-is section of the pod description Author: Olivier Sallou Last-Updated: 2012-08-01 Forwarded: yes Bug-cpan: https://rt.cpan.org/Public/Bug/Display.html?id=78708 --- a/lib/Bio/Chado/NaturalDiversity/Reports.pm +++ b/lib/Bio/Chado/NaturalDiversity/Reports.pm @@ -8,7 +8,7 @@ =head1 NAME -Bio::Chado::NaturalDiversity::Reports +Bio::Chado::NaturalDiversity::Reports - Collection of functions for formatting Chado stock related data =head1 SYNOPSIS debian/patches/fix_spelling0000644000000000000000000000116612006237232013224 0ustar Subject: fix spelling errors Author: Olivier Sallou Description: remove spelling errors from doc Last-Updated: 2012-08-01 Forwarded: yes Bug-cpan: https://rt.cpan.org/Public/Bug/Display.html?id=78709 --- a/lib/Bio/Chado/Schema/Result/Composite.pod +++ b/lib/Bio/Chado/Schema/Result/Composite.pod @@ -2,7 +2,7 @@ =head1 NAME -Bio::Chado::Schema::Result::Composite - A collection of bridge codes that have multiple dependancies +Bio::Chado::Schema::Result::Composite - A collection of bridge codes that have multiple dependencies so they don't happily go where is most obvious =head1 CHADO MODULE debian/patches/series0000644000000000000000000000004012006237232012021 0ustar bad_whatis_section fix_spelling debian/copyright0000644000000000000000000000225212006237232011117 0ustar Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ Source: http://search.cpan.org/dist/Bio-Chado-Schema/ Upstream-Name: Bio-Chado-Schema Files: maint/bin/update_dbic_dump.pl lib/Bio/Chado/Schema.pm lib/Bio/Chado/Schema/Util.pm Copyright: 2009, Boyce Thompson Institute for Plant Research License: Artistic or GPL-1+ Files: * Copyright: 2011, Robert Buels License: Artistic or GPL-1+ Files: debian/* Copyright: 2011, Olivier Sallou License: Artistic or GPL-1+ License: Artistic This program is free software; you can redistribute it and/or modify it under the terms of the Artistic License, which comes with Perl. . On Debian systems, the complete text of the Artistic License can be found in `/usr/share/common-licenses/Artistic'. License: GPL-1+ This program is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 1, or (at your option) any later version. . On Debian systems, the complete text of version 1 of the GNU General Public License can be found in `/usr/share/common-licenses/GPL-1'. debian/watch0000644000000000000000000000017512006237232010217 0ustar version=3 http://search.cpan.org/dist/Bio-Chado-Schema/ .*/Bio-Chado-Schema-v?(\d[\d.-]+)\.(?:tar(?:\.gz|\.bz2)?|tgz|zip)$