debian/0000755000000000000000000000000012243100656007165 5ustar debian/control0000644000000000000000000000234012243066122010566 0ustar Source: librg-utils-perl Maintainer: Debian Med Packaging Team Uploaders: Guy Yachdav , Laszlo Kajan , Andreas Tille Section: perl Priority: optional Build-Depends: debhelper (>= 9), perl, autotools-dev Standards-Version: 3.9.4 Vcs-Browser: http://anonscm.debian.org/viewvc/debian-med/trunk/packages/rostlab/librg-utils-perl/trunk/ Vcs-Svn: svn://anonscm.debian.org/debian-med/trunk/packages/rostlab/librg-utils-perl/trunk/ Homepage: http://predictprotein.org/ Package: librg-utils-perl Architecture: all Depends: ${perl:Depends}, ${misc:Depends}, liblist-moreutils-perl, profphd-utils Description: parsers and format conversion utilities used by (e.g.) profphd This package contributes to the PredictProtein server for the automated structural annotation of protein sequences. It features as series of conversion tools like: . * blast2saf.pl * blastpgp_to_saf.pl * conv_hssp2saf.pl * copf.pl * hssp_filter.pl * safFilterRed.pl . which are supported by the modules: . * RG:Utils::Conv_hssp2saf * RG:Utils::Copf * RG:Utils::Hssp_filter debian/rules0000755000000000000000000000057712243075774010272 0ustar #!/usr/bin/make -f # -*- makefile -*- # Uncomment this to turn on verbose mode. #export DH_VERBOSE=1 DEBPKGNAME := $(shell dpkg-parsechangelog | awk '/^Source:/ {print $$2}') %: dh $@ --with autotools_dev override_dh_auto_install: $(MAKE) DESTDIR=$(CURDIR)/debian/$(DEBPKGNAME) install override_dh_auto_clean: dh_auto_clean if [ -f Makefile ] ; then make distclean ; fi debian/watch0000644000000000000000000000013312243065040010210 0ustar version=3 opts=pasv ftp://rostlab.org/librg-utils-perl/librg-utils-perl-([0-9.]+)\.tar\.gz debian/copyright0000644000000000000000000000337412243100464011124 0ustar Format: http://www.debian.org/doc/packaging-manuals/copyright-format/1.0/ Upstream-Contact: Burkhard Rost Dariusz Przybylski Source: ftp://rostlab.org/librg-utils-perl/ Files: * Copyright: 2009-2011 by Laszlo Kajan Technical University Munich (Munich, DE) 2009-2011 by Guy Yachdav CUBIC (Columbia University, NY, USA) and Technical University Munich (Munich, DE) 2000, Burkhard Rost, Technical University Munich, Germany 2000, Burkhard Rost, CUBIC (Columbia Univ) NY, USA 2000, Dariusz Przybylski, CUBIC (Columbia Univ) NY, USA 1998, Burkhard Rost, EMBL-Heidelberg, Germany License: GPLv2+ License: GPLv2+ This package is free software; you can redistribute it and/or modify it under the terms of the GNU General Public License as published by the Free Software Foundation; either version 2 of the License, or (at your option) any later version. . This package is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details. . You should have received a copy of the GNU General Public License along with this package; if not, write to the Free Software Foundation, Inc., 51 Franklin St, Fifth Floor, Boston, MA 02110-1301 USA . On Debian systems, the complete text of the GNU General Public License can be found in `/usr/share/common-licenses/GPL'. Files: debian/* Copyright: © 2009 Guy Yachdav © 2011 Laszlo Kajan © 2013 Andreas Tille License: GPLv2+ debian/source/0000755000000000000000000000000011664721565010503 5ustar debian/source/format0000644000000000000000000000001411664721335011704 0ustar 3.0 (quilt) debian/README.Debian0000644000000000000000000000035311664721335011240 0ustar librg-utils-perl for Debian --------------------------- This package presents perl utilities that are used by predictors from the Rost Lab, for example profphd. -- Laszlo Kajan Wed, 28 Sep 2011 11:18:39 +0200 debian/changelog0000644000000000000000000000145412243100524011035 0ustar librg-utils-perl (1.0.43-2) unstable; urgency=low * debian/control: - Priority: optional - cme fix dpkg-control - debhelper 9 - canonical Vcs URLs * debian/rules: - use dh - fix clean target * debian/copyright: DEP5 -- Andreas Tille Wed, 20 Nov 2013 08:55:26 +0100 librg-utils-perl (1.0.43-1) unstable; urgency=low * New upstream release -- Laszlo Kajan Fri, 28 Oct 2011 22:20:27 +0200 librg-utils-perl (1.0.42-1) unstable; urgency=low * Initial release (Closes: #643630) * New upstream release -- Laszlo Kajan Wed, 28 Sep 2011 15:10:22 +0200 librg-utils-perl (1.0.41-1) UNRELEASED; urgency=low * New upstream release -- Laszlo Kajan Wed, 28 Sep 2011 11:15:17 +0200 debian/compat0000644000000000000000000000000212243065511010363 0ustar 9